Knowledge representation in metabolic pathway databases
نویسندگان
چکیده
منابع مشابه
Representation of knowledge production of leadership and educational management in international specialized journals and global databases
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MOTIVATION A number of metabolic databases are available electronically, some with features for querying and visualizing metabolic pathways and regulatory networks. We present a unifying, systematic approach based on PETRI nets for storing, displaying, comparing, searching and simulating such nets from a number of different sources. RESULTS Information from each data source is extracted and c...
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Metabolic pathway databases such as KEGG contain information on thousands of enzymatic reactions drawn from the biomedical literature. Ensuring consistency of such large metabolic pathways is essential to their proper use. In this paper, we develop an efficient method to determine consistency of an important class of enzymatic reactions, and test the method on the latest release of the KEGG LIG...
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ژورنال
عنوان ژورنال: Briefings in Bioinformatics
سال: 2012
ISSN: 1467-5463,1477-4054
DOI: 10.1093/bib/bbs060